Browse of TCMCG015C35950 protein

CDS

Accession Number	TCMCG015C35950
gbkey	CDS
Protein Id	XP_027065416.1
Location	complement(join(12933020..12933652,12934178..12934952,12935726..12935866,12936424..12936662,12936771..12936969,12940007..12940209,12941609..12941814,12942783..12942921,12943026..12943343,12943536..12943754,12943875..12944022,12944115..12944203,12950511..12950774,12951732..12951925,12953713..12953875,12953987..12954166,12954966..12955244,12956327..12956632,12956795..12956954,12958281..12958453,12958986..12959003))
Gene	LOC113691473
GeneID	113691473
Organism	Coffea arabica

Protein

Length	1681aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA506972
db_source	XM_027209615.1
Definition	DNA-directed RNA polymerase I subunit 1 isoform X1 [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category	K
Description	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KEGG_TC	-
KEGG_Module	M00182        [VIEW IN KEGG]
KEGG_Reaction	R00435        [VIEW IN KEGG] R00441        [VIEW IN KEGG] R00442        [VIEW IN KEGG] R00443        [VIEW IN KEGG]
KEGG_rclass	RC02795        [VIEW IN KEGG]
BRITE	br01611        [VIEW IN KEGG] ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K02999        [VIEW IN KEGG]
EC	2.7.7.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko00230        [VIEW IN KEGG] ko00240        [VIEW IN KEGG] ko01100        [VIEW IN KEGG] ko03020        [VIEW IN KEGG] map00230        [VIEW IN KEGG] map00240        [VIEW IN KEGG] map01100        [VIEW IN KEGG] map03020        [VIEW IN KEGG]
GOs	GO:0000428        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005736        [VIEW IN EMBL-EBI] GO:0005911        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006351        [VIEW IN EMBL-EBI] GO:0006360        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009058        [VIEW IN EMBL-EBI] GO:0009059        [VIEW IN EMBL-EBI] GO:0009506        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0018130        [VIEW IN EMBL-EBI] GO:0019438        [VIEW IN EMBL-EBI] GO:0030054        [VIEW IN EMBL-EBI] GO:0030880        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032774        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034645        [VIEW IN EMBL-EBI] GO:0034654        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044249        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044271        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044452        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0055029        [VIEW IN EMBL-EBI] GO:0055044        [VIEW IN EMBL-EBI] GO:0061695        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097659        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901362        [VIEW IN EMBL-EBI] GO:1901576        [VIEW IN EMBL-EBI] GO:1902494        [VIEW IN EMBL-EBI] GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCTCAGACTACTGAGGGTGGTGCATCGGAGGCAGTGGAGAAGGTTCTATTTAGTTTTATGACTTCTGAGGAGGTCAGGAAGCATAGTGTTGTAAAGATTAAAAATCCTGTCTTGCTTGATACCGTGGGAAGGCCAATGCCGGGTGGGCTATATGATCCAGCCATGGGTCCTTTTGATGAACAGTCTCCATGCAAATCTTGCGGTCAGCGGTCATTCCACTGCACTGGTCATTGTGGTCATATTGAGCTTGTTTCACCAGCCTACAATCCATTACTTTTTAATATGCTGTACAACCTACTGCAAAGAACCTGCTTCTATTGCTTTCATTTTCGATCAAGTACAGAAGAGGTGGATAAATGTGTACTTCAATTGGAACGAATTGCAAAGGGTGATGTCATAGGTGCAAAAAGGTTGGATGCAGCCTCTTCAGCTGACTTGGTTAACTCAGAGGATAGTGAAGGGAGCCACGTATCTTGTGGTAATGTCTATCATGGTGCAGAAGAGCATATGAAACAGCCTTCTTGGGATTCTTTTCAGTTTACTGAAGCTATGTCTGTTCTAAATATGTTTCTGAAGCCAAAACTTTCCAAGTGTGGTAAATGTGAGGCTAAAAATCCAAAGATCAAGAAACCAACCTTCGGATGGTTTCACATGGTTGTTTCGAATGCTCAAACTCGTGCGAACATAATTCGGGGCCACAGATTAGATGGGTTTCGCTCTGGTGGATCTGAGGAAAGATCTTCTTCTGAGGTTGTAAATGCTAATGACTCTTTGTGGGAGGATGATTCCCAAACAGGCAAAACTGCGTCATATACTGTCTCTGATGGAATAGATACTCCTGTGGCAAAAAAATCTCCAAATCAACCTGGAAGAGTGGGTGAGGAGTTGAAGAAGCAGAAGGAAGCCTTTTCAGAGCATCTTTTACCATCTGAGGTTAGGGATGTAGTGAAACGACTGTGGGAAAATGAGGCTCCCCTCTGCTCATTTATCTGTGACCTTCAGCGGGAGCAACATAACTCAGCTGCTGGAATCGCAGGTTATTCAATGTTTTTTTTGGATTCCATTCTTGTTCCACCAATCAAATTTCGTCCTCTGGCCAGAACTGGTGATGCAGTAATGGAGCATCCTCATACTAATTTGTTAAGCAAGGTGCTGCAATCGAATATAGCTCTAGGCAATGCTTACATTAATAATGCTGAGCGCTACAAGATTGTCAATCGTTGGATGGATCTTCAGCAGTCTATTAGTGTTTTATATGATAGCAAAACAACTACAGCAGGTCAAAGTCAAAAAGCTGGGCCTGTAGGAATTTGTCAGTTGTTGGAAAAAAAGGAGGGTATTTTTCGACAAAAAATGATGGGAAAGAGGGTGAATTTTGCTTGCCGGTCCGTTATATCTCCAGATCCTTATCTGGCAGTCAATGAAATTGGGGTTCCTCCATATTTTGCTTTGAGGTTAACTTATCCTGAGAGAGTGACTCCTTGGAATGTTGGCAAACTAAGAGGTGCCATAGTTAATGGTCCAGAAATTCATCCTGGAGCTCTATCCTATACTGATAAAGTGTCTACTGTAAAACTTCCATCAAGCAAAAAAATGCGTATAGCAATATCTAGAAAGTTGCCTTCTTCTAGAGGAGTGGTAACACAGCTGGGGAAGAATAGTGAGCATGAATTTGAGGGGAAAGTTGTCTATCGCCATCTACAAGATGGAGATGTTGTACTTGTCAATCGACAGCCTACTCTTCACAAGCCAAGTATAATGGCTCATGTAGTTCGTGTGTTGAAAGGGGAAAAAACTCTTCGCATGCATTATGCAAATTGCAGTTCATACAATGCTGATTTTGATGGAGACGAAATGAATGTTCATTTTCCTCAAGATGAAATTTCTCGTGCTGAAGCTTATAACATTGTGAATGCCAACGAACAGTATATAGTTCCAACCAGGGGAGATACTGTTAGAGGCTTGATTCAGGATCATATTGGAAGTGCCGTGCTTCTAACTATGAAGGATACTTTTTTGACTTATGATGAATTCAATCAACTTCTTTATGGTTCTGGTGTCTTTACAACAGGGAGTAGTTGCACTTTTAGCAATTATTCTGGAAAAATTTCCATTGTAGATTCTGAAGGTATTATCCAGCCTATCTTGCCAGCTGTATTGAAACCAAAGCCTCTGTGGACAGGGAAGCAGGTTATCACTGCACTACTAAATCAATTGACAAAGGGGTGCGCGCCTTGTTCTATTGAAAAAGAGATGAAAATTCCGAAGCAGTATTTTCCGACTGAGACCTATGAGGTTCAACAGAGTGAAAATGACGATAAGGAAAATGGCGAAAAGAAAGCTGATAATTGTTTATTAGTTTGGAAAAATGAGCTTGTTCGTGGTGTTATAGATAAGGCACAGTTTGGCCAATTTGGTCTTGTGCACAGTATACAGGAGCTCTATGGGGCAAACACTGCAGGCCTTTTACTTTCTGCACTTAGTCGACTGTTTACAATGTTTTTACAGATGCATGGCTTCACATGTGGGGTAGAGGACCTTATAATATTGCCTCATTTTGATTTGCGAAGGAAGGAGGAGCTTGAGGGTGAAGATGTTGGTGAAGATGTTCACTGTGAATTTGTCAACTTCAAACGTGGACAAATAGGTCCTTTAGAACTGCAATTGGAAATTGAGAAAGTAATTTGCCGAGACAGAGAAGCTGCTACAGCATCATTAGACATGAAGATGAAAAATAAACTTACTAAGAAGGCTTCACAGATCAGCAAGGAATTGCTTCTTAAAGGATTGTTAAAACCCTTTCCTAAGAACTGCATCTCTCTTATGACAATAAGTGGGGCTAAGGGTAGCACGGTCAACTTCCAGCAAATATCTTCATACCTAGGGCAGCAAGAGTTAGAAGGTAAAAGGGTTCCACGAATGGTTTCTGGAAAGACTTTGCCTTGTTTTCCACCATGGGATTTTACTTCTAGGGCTGGGGGCTACATCACGGATCGTTTCCTTTCTGGTCTTCGCCCACAGGAATATTACTTTCACTGCATGGCTGGTCGTGAAGGGTTAGTCGATACTGCTGTTAAAACGTCTCGCAGTGGATACCTCCAGAGGTGCTTAATAAAGAATCTTGAGAGTCTGAAAGTTTGCTATGATTATACCGTCCGTGATGCTGACGGATCCATTGTTCAGTTTTATTATGGGGAAGATGGTGTTGATGTTCATCGGACCAGCTTTCTCAAGAACCTCAGAGCGCTGGCTCTTAATCAGGTGCCTGTCCGTCAAAAATATGAACGTGAGCGTGACTTCAATGCTTATATTGTTGAGTTGCCAGATGGGTTGAAAAGAAAAGCTGAAGGTTTTCTAAAAGGGGTAAATACTGATTCTCACATGGACTTTATGACATTGCTTGCACAAAAATATCTCTCAAGTCTTGCACCTTCGGGGGAACCAGTTGGTGTCATTGCTGCTCAATCTGTTGGCGAACCATCTACCCAGATGACGTTGAACACTTTCCATCTAGCCGGCCGCGGAGAAATGAATGTGACCCTTGGTATTCCCCGTCTGCAGGAGATTTTGATGACTGCTGCTCAGGTTATCAAGACTCCCGTTATGACATGTCCTTTTCTGCAGTTTAAGTCCATGGATGATGCTAAGTCTCTTGTGGCAAAAGTCAAGAAAATCACTGTTGCAGACATTATAGAGAGCATGGAAGTGCATCTTCTGCCACTTTCTGTCCTCAACAATGGAATTGGAATAATTTATAAGCTCATGATGACCTTTAAACACCATGAGTTCGCTTCATCAGAAGATTGCAAGGAAACTCTTAGACATTCATTCTTGAGGGAATTAGAGGATGTGATACAAAACCATTTGGTATTGCTTTCCAGGATTAGTGGAATAAAAAATATAATGTCAAACACACGTTCCAAAGGAAATGAGACGGATGAGGATGCTTCTGGTGTGACATCTCATGAAGAGGGAGATGATGAAAATGATGATGGTGATGGTGGAAAAGGCAACGATGACATGGCTGAAGATCTTGGATCTGATGCACAGAAGAGGAAACAGCAGGCTACTGATGAGATGGACTATGAAGACATCACTGAGGATGAGTCAACTGCTGATCATGAACAAGGAAAAGATGGTCAGTCAAATGATGAGGGTGAAATTAGGGAGGGTAAGGAAGCCATGGATGTTGATGATGAGCATGCTATTGAAATGGAACATGATAATGAAGAAATGTCAAAGCCTAAATCGGGCAACAAAAATGGAAAATCAACACTCAAAAAGAGGAAGAAGGCGGAGAAAAAATTTGTCAGGAAGGAAACTGATAGAAATATATTTGTGGAAGTTGAAGGGCAAAAGTTTGAAGCCCATTTTGGATTTACCAACGAACCCCATATCTTGCTAGCTCAGATTGCTCAGAAGACTGCGAAGCATGTGTACATCAAGAGCTCCGGCAAGATCAATCAGTGTAAAATGGTTGAACATGATGTAAGTGAAAATACAGTCATCTGGGATGCGAAGAAAGTGGATAAAAAAATCAAGGCAAAAAAACAGATGAAAGCAAATGTAGATGACCTATTGCCTTATTGGGCTCTCAAGGCTGCAGGTGTTGACTTCATTCCTTTCTGGGAAATGCAAGATGATCTTGACACTGCACGTATATATTCTAATAGCATTCAAGCGATGCTGGAAACATATGGAGTTGAAGCTGCTAGAGCGACCATCATAAGAGAGGTGACGAATGTTTTTGGTATCTATGGAGTACAGATAGACTACCGGCATTTAAGCTTAATTGCGGATTACATGACTCACTCTGGTGGCTACCGGCCAATGAGTAGACATGGAAGTATAGCGGAATCTCTATCACCATTGGCTAAAATGTCTTTTGAGACAGCTGGAAAATTTATAGTTGAAGCTGCATCTCATGGGATGACTGACAACTTGGAGACACCATCTTCAAGAATTTGCCTTGGCTTGCCAGTTAAAATGGGTACTGGGTGCTTTGACTTGATGCAGCAGTTGGATACTGATATCAATGTATAG

Protein:   MAQTTEGGASEAVEKVLFSFMTSEEVRKHSVVKIKNPVLLDTVGRPMPGGLYDPAMGPFDEQSPCKSCGQRSFHCTGHCGHIELVSPAYNPLLFNMLYNLLQRTCFYCFHFRSSTEEVDKCVLQLERIAKGDVIGAKRLDAASSADLVNSEDSEGSHVSCGNVYHGAEEHMKQPSWDSFQFTEAMSVLNMFLKPKLSKCGKCEAKNPKIKKPTFGWFHMVVSNAQTRANIIRGHRLDGFRSGGSEERSSSEVVNANDSLWEDDSQTGKTASYTVSDGIDTPVAKKSPNQPGRVGEELKKQKEAFSEHLLPSEVRDVVKRLWENEAPLCSFICDLQREQHNSAAGIAGYSMFFLDSILVPPIKFRPLARTGDAVMEHPHTNLLSKVLQSNIALGNAYINNAERYKIVNRWMDLQQSISVLYDSKTTTAGQSQKAGPVGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGVPPYFALRLTYPERVTPWNVGKLRGAIVNGPEIHPGALSYTDKVSTVKLPSSKKMRIAISRKLPSSRGVVTQLGKNSEHEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTRGDTVRGLIQDHIGSAVLLTMKDTFLTYDEFNQLLYGSGVFTTGSSCTFSNYSGKISIVDSEGIIQPILPAVLKPKPLWTGKQVITALLNQLTKGCAPCSIEKEMKIPKQYFPTETYEVQQSENDDKENGEKKADNCLLVWKNELVRGVIDKAQFGQFGLVHSIQELYGANTAGLLLSALSRLFTMFLQMHGFTCGVEDLIILPHFDLRRKEELEGEDVGEDVHCEFVNFKRGQIGPLELQLEIEKVICRDREAATASLDMKMKNKLTKKASQISKELLLKGLLKPFPKNCISLMTISGAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFPPWDFTSRAGGYITDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIVQFYYGEDGVDVHRTSFLKNLRALALNQVPVRQKYERERDFNAYIVELPDGLKRKAEGFLKGVNTDSHMDFMTLLAQKYLSSLAPSGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAQVIKTPVMTCPFLQFKSMDDAKSLVAKVKKITVADIIESMEVHLLPLSVLNNGIGIIYKLMMTFKHHEFASSEDCKETLRHSFLRELEDVIQNHLVLLSRISGIKNIMSNTRSKGNETDEDASGVTSHEEGDDENDDGDGGKGNDDMAEDLGSDAQKRKQQATDEMDYEDITEDESTADHEQGKDGQSNDEGEIREGKEAMDVDDEHAIEMEHDNEEMSKPKSGNKNGKSTLKKRKKAEKKFVRKETDRNIFVEVEGQKFEAHFGFTNEPHILLAQIAQKTAKHVYIKSSGKINQCKMVEHDVSENTVIWDAKKVDKKIKAKKQMKANVDDLLPYWALKAAGVDFIPFWEMQDDLDTARIYSNSIQAMLETYGVEAARATIIREVTNVFGIYGVQIDYRHLSLIADYMTHSGGYRPMSRHGSIAESLSPLAKMSFETAGKFIVEAASHGMTDNLETPSSRICLGLPVKMGTGCFDLMQQLDTDINV